STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58719.15-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mta:Moth_1492 5-carboxymethyl-2-hydroxymuconate delta-isomerase. (251 aa)    
Predicted Functional Partners:
EEF62309.1
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: rca:Rcas_0560 FAD linked oxidase domain-containing protein.
  
 
  0.739
EEF62745.1
PFAM: FAD linked oxidase domain protein; KEGG: scl:sce2118 putative oxidoreductase.
  
 
  0.739
EEF59853.1
Hypothetical protein; KEGG: scl:sce4509 putative glutathione S-transferase.
  
 
 0.698
EEF59486.1
KEGG: cau:Caur_2969 malate synthase A; TIGRFAM: malate synthase A; PFAM: malate synthase; Belongs to the malate synthase family.
    
 0.668
EEF57161.1
TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ote:Oter_3521 D-3-phosphoglycerate dehydrogenase.
    
 0.630
EEF58718.1
KEGG: ote:Oter_1641 hypothetical protein.
       0.610
EEF57761.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: tpe:Tpen_0823 glyoxylate reductase.
  
  0.606
EEF62550.1
KEGG: rha:RHA1_ro08824 fumarate hydratase, class I; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region.
  
  
  0.605
EEF57978.1
TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: lic:LIC12001 succinate dehydrogenase cytochrome b subunit.
    
  0.577
EEF60639.1
PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; KEGG: rba:RB8262 proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.563
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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