STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58955.1KEGG: dol:Dole_2340 hypothetical protein. (182 aa)    
Predicted Functional Partners:
EEF61316.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: amr:AM1_6366 ferredoxin dependent glutamate synthase 1, putative.
   
 0.860
EEF61321.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: min:Minf_2281 glutamate synthase domain large chain.
   
 0.860
EEF62833.1
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: ote:Oter_0679 carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 0.823
EEF62602.1
PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: afw:Anae109_3313 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.715
EEF62369.1
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: hau:Haur_3584 asparagine synthase (glutamine-hydrolyzing).
   
 0.564
EEF59781.1
PFAM: amidohydrolase; KEGG: min:Minf_0720 N-acetylglucosamine-6-phosphate deacetylase.
    
 0.558
EEF62532.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bcm:Bcenmc03_6442 GCN5-related N-acetyltransferase.
   
 0.557
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
 0.547
EEF58956.1
PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: rle:RL0646 putative aldolase.
       0.542
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: mxa:MXAN_6908 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.533
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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