STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58960.1PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: ava:Ava_3508 signal transduction protein. (280 aa)    
Predicted Functional Partners:
EEF57700.1
PFAM: HEAT domain containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ana:alr1903 unknown protein.
  
     0.774
EEF58232.1
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ava:Ava_3508 signal transduction protein.
  
     0.774
EEF59493.1
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_1736 PBS lyase heat domain protein repeat-containing protein.
  
     0.773
EEF62688.1
PFAM: HEAT domain containing protein; KEGG: ter:Tery_0826 heat domain-containing protein.
  
     0.771
EEF57326.1
PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: ana:alr2986 unknown protein.
  
     0.768
EEF61324.1
PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: ana:alr2986 unknown protein.
  
     0.761
xerC
Integrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.561
EEF58961.1
KEGG: cph:Cpha266_0253 addiction module component.
       0.506
EEF57136.1
KEGG: npu:Npun_F4948 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
     0.504
EEF57989.1
PFAM: deoxyhypusine synthase; KEGG: gvi:glr1045 deoxyhypusine synthase.
  
   0.485
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.