STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59033.1Hypothetical protein; KEGG: bbr:BB2694 large subunit of N,N-dimethylformamidase. (598 aa)    
Predicted Functional Partners:
EEF59326.1
PFAM: inner-membrane translocator; KEGG: ote:Oter_2016 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    
   0.942
EEF61950.1
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
  
  0.754
EEF63413.1
TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: gvi:gll0958 probable urea amidolyase.
    
  0.728
EEF63146.1
PFAM: Fibronectin type III domain protein; KEGG: gvi:glr0592 hypothetical protein.
    
 0.658
EEF60771.1
FOG: WD40-like repeat-like protein; KEGG: rba:RB8639 hypothetical protein.
  
     0.602
EEF59034.1
PFAM: Creatininase; KEGG: syn:slr0596 creatinine amidohydrolase.
 
     0.597
EEF60728.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
  0.588
EEF59032.1
PFAM: membrane protein of uknown function UCP014873; KEGG: syn:sll1106 hypothetical protein.
       0.525
EEF62221.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ote:Oter_0996 methyltransferase type 12.
  
     0.476
EEF61442.1
KEGG: sus:Acid_3555 hypothetical protein.
  
     0.458
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.