STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59397.1PFAM: band 7 protein; KEGG: rrs:RoseRS_2221 band 7 protein. (297 aa)    
Predicted Functional Partners:
EEF59398.1
PFAM: band 7 protein; KEGG: cau:Caur_3117 band 7 protein.
 
     0.952
EEF60762.1
KEGG: min:Minf_1912 ATP-dependent Zn protease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Belongs to the AAA ATPase family.
   
  0.728
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
  0.728
ftsH-2
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
  0.728
EEF61459.1
KEGG: sus:Acid_3667 hypothetical protein.
  
     0.537
EEF58387.1
KEGG: swo:Swol_1794 putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
    0.486
EEF57507.1
PFAM: N-6 DNA methylase; KEGG: rrs:RoseRS_2939 N-6 DNA methylase.
  
     0.464
EEF59502.1
PFAM: UspA domain protein; KEGG: pcu:pc0262 hypothetical protein.
  
     0.446
EEF61238.1
PFAM: UspA domain protein; KEGG: pcu:pc0262 hypothetical protein.
  
     0.423
EEF61789.1
KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
   0.403
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.