STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59429.1PFAM: beta-lactamase domain protein; KEGG: sus:Acid_5491 beta-lactamase domain-containing protein. (356 aa)    
Predicted Functional Partners:
EEF62868.1
PFAM: protein of unknown function DUF1080; KEGG: rba:RB10138 putative membrane lipoprotein.
  
     0.695
EEF57990.1
PFAM: fatty acid hydroxylase; KEGG: ade:Adeh_2669 hypothetical protein.
  
     0.599
EEF57586.1
PFAM: protein of unknown function DUF72; KEGG: sus:Acid_4697 hypothetical protein.
  
     0.549
EEF59396.1
PFAM: oxidoreductase domain protein; KEGG: sus:Acid_7764 oxidoreductase domain-containing protein.
  
     0.541
EEF57906.1
PFAM: NHL repeat containing protein; KEGG: sus:Acid_1144 NHL repeat-containing protein.
  
     0.539
EEF57146.1
KEGG: sus:Acid_1077 alpha/beta hydrolase domain-containing protein.
  
     0.489
EEF61194.1
PFAM: oxidoreductase domain protein; KEGG: sus:Acid_1336 putative streptomycin biosynthesis protein StrI.
  
     0.489
EEF60116.1
KEGG: sus:Acid_4741 hypothetical protein.
  
     0.471
EEF57640.1
PFAM: putative esterase; KEGG: sus:Acid_3641 putative esterase.
  
     0.468
EEF61368.1
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sus:Acid_2635 major facilitator transporter.
  
     0.467
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.