STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59538.1KEGG: psb:Psyr_0612 nucleotidyl transferase. (254 aa)    
Predicted Functional Partners:
EEF61709.1
KEGG: dra:DR_A0367 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like.
  
 
 0.843
EEF59565.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cjd:JJD26997_1807 HAD superfamily hydrolase.
    0.815
EEF58274.1
Nucleotide sugar dehydrogenase; KEGG: min:Minf_0010 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; Ketopantoate reductase ApbA/PanE domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase.
  
 
 0.813
EEF60306.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.790
EEF62384.1
PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4265 glycosyl transferase, family 2.
  
  
 0.753
EEF56980.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: reu:Reut_A0712 dTDP-glucose 4,6-dehydratase.
  
 
 0.653
EEF60577.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rso:RSc0682 dTDP-glucose 4,6-dehydratase protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.653
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
 0.638
EEF59533.1
Hypothetical protein; KEGG: cja:CJA_3417 polysaccharide biosynthesis family protein.
  
  
 0.578
EEF63158.1
PFAM: polysaccharide biosynthesis protein; KEGG: mla:Mlab_0894 hypothetical protein.
  
  
 0.578
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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