STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59572.1PFAM: glycosyl transferase family 2; KEGG: mar:MAE_59470 probable glycosyl transferase. (398 aa)    
Predicted Functional Partners:
EEF59573.1
KEGG: sus:Acid_4389 hypothetical protein.
       0.664
EEF59571.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gvi:glr1179 similar to CDP-tyvelose epimerase.
 
 
  0.600
EEF58966.1
PFAM: glycosyl transferase family 2; KEGG: mem:Memar_1870 glycosyl transferase, family 2.
  
     0.593
EEF59570.1
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: ote:Oter_3990 NAD-dependent epimerase/dehydratase.
 
 
  0.556
EEF59569.1
PFAM: glycosyl transferase family 2; KEGG: rba:RB8905 putative polyprenol phosphate mannosyl transferase 1 (Ppm1).
 
    
0.536
EEF61062.1
PFAM: phosphoesterase PA-phosphatase related; KEGG: min:Minf_2306 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family.
  
 
 0.504
EEF63447.1
KEGG: min:Minf_2306 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family.
  
 
 0.504
EEF62384.1
PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4265 glycosyl transferase, family 2.
 
 
 0.487
EEF60530.1
PFAM: GCN5-related N-acetyltransferase; KEGG: sus:Acid_5401 GCN5-related N-acetyltransferase.
  
     0.449
EEF59063.1
KEGG: fra:Francci3_2394 hypothetical protein.
  
     0.445
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.