STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59604.1PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; LamG domain protein jellyroll fold domain protein; KEGG: dsy:DSY0542 hypothetical protein. (755 aa)    
Predicted Functional Partners:
EEF60288.1
PFAM: Immunoglobulin I-set domain protein; KEGG: ote:Oter_4612 immunoglobulin I-set domain protein.
  
     0.741
EEF61804.1
PFAM: Immunoglobulin I-set domain protein; KEGG: hmo:HM1_0137 hypothetical protein.
  
     0.722
EEF58879.1
KEGG: dsy:DSY0542 hypothetical protein.
  
     0.694
EEF62518.1
Hypothetical protein; KEGG: ote:Oter_0854 immunoglobulin I-set domain protein.
  
     0.622
EEF60399.1
PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: hmo:HM1_0138 hypothetical protein.
  
     0.595
EEF58391.1
Hypothetical protein; KEGG: glo:Glov_2915 cell wall/surface repeat protein.
  
     0.507
EEF59547.1
PFAM: glycoside hydrolase family 25; Immunoglobulin I-set domain protein; KEGG: glo:Glov_2915 cell wall/surface repeat protein.
  
  
  0.439
EEF60862.1
Cyclase/dehydrase; KEGG: ote:Oter_1109 cyclase/dehydrase.
  
     0.417
EEF62554.1
PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; KEGG: rba:RB4278 hypothetical protein.
  
     0.400
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.