STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59732.1KEGG: atc:AGR_L_1124 hypothetical protein. (99 aa)    
Predicted Functional Partners:
EEF59731.1
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
 
  
  0.847
EEF62456.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_2920 cupin 2, conserved barrel.
  
     0.773
EEF58745.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: rme:Rmet_4316 cupin 2, conserved barrel.
  
     0.771
EEF59589.1
PFAM: alpha/beta hydrolase fold; KEGG: smd:Smed_3910 alpha/beta hydrolase fold.
  
  
  0.715
EEF57649.1
NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: mlo:mlr0977 hypothetical protein.
  
     0.703
EEF61422.1
PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bxe:Bxe_B0544 hypothetical protein.
  
     0.607
EEF59733.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: afw:Anae109_1050 alcohol dehydrogenase zinc-binding domain protein.
  
    0.592
EEF60096.1
KEGG: bch:Bcen2424_5292 hypothetical protein.
  
     0.538
EEF60843.1
KEGG: gur:Gura_0539 hypothetical protein.
  
 
   0.532
EEF62972.1
KEGG: bxe:Bxe_B2092 hypothetical protein.
  
     0.485
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.