STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59646.1PFAM: MotA/TolQ/ExbB proton channel; KEGG: ote:Oter_3325 MotA/TolQ/ExbB proton channel. (244 aa)    
Predicted Functional Partners:
EEF59645.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aci:ACIAD1590 putative biopolymer transport protein (ExbD-like).
 
   0.972
EEF58440.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpc:RPC_2991 biopolymer transport protein ExbD/TolR.
 
   0.920
pal
TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_3633 peptidoglycan-associated lipoprotein, putative; Belongs to the Pal lipoprotein family.
 
   
 0.916
EEF59643.1
PFAM: WD40 domain protein beta Propeller; KEGG: eba:ebA2650 translocation protein TolB.
 
    0.910
EEF58493.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: min:Minf_0918 biopolymer transport protein ExbD/TolR.
  
   0.775
EEF59557.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: min:Minf_2323 biopolymer transport protein.
  
   0.768
EEF60407.1
TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: min:Minf_0751 outer membrane protein.
  
     0.753
EEF59558.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: min:Minf_2323 biopolymer transport protein.
  
   0.729
EEF59644.1
TIGRFAM: TonB family protein; KEGG: prw:PsycPRwf_1514 TonB family protein.
  
   0.729
EEF61528.1
PFAM: protein of unknown function DUF214; KEGG: min:Minf_0204 ABC-type transport system, involved in lipoprotein release, permease component.
  
    0.695
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.