STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59810.1PFAM: Ferritin Dps family protein; KEGG: aba:Acid345_3741 ferritin and Dps; Belongs to the Dps family. (202 aa)    
Predicted Functional Partners:
EEF60717.1
PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: min:Minf_0656 ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family.
   
 
 0.939
EEF60969.1
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: mmw:Mmwyl1_4139 flavoprotein WrbA.
  
  
 0.679
EEF61071.1
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: pol:Bpro_4613 sigma 54 modulation protein / SSU ribosomal protein S30P.
   
    0.677
EEF62770.1
Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: lbf:LBF_4141 peroxiredoxin.
  
  
 0.648
EEF59809.1
PFAM: Inorganic pyrophosphatase; KEGG: sus:Acid_3005 inorganic diphosphatase.
     
 0.541
EEF58182.1
PFAM: OsmC family protein; KEGG: hch:HCH_01483 redox protein, regulator of disulfide bond formation.
  
  
 0.432
EEF62569.1
PFAM: OsmC family protein; KEGG: csa:Csal_1158 OsmC-like protein.
  
  
 0.432
EEF57311.1
PFAM: Peptidoglycan-binding LysM; KEGG: ote:Oter_0628 peptidoglycan-binding LysM.
   
    0.414
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.405
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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