STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60013.1Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1. (435 aa)    
Predicted Functional Partners:
EEF59982.1
KEGG: gur:Gura_0373 alpha-tubulin suppressor and related RCC1domain-containing protein.
 
     0.828
EEF62986.1
KEGG: ote:Oter_1394 immunoglobulin I-set domain protein.
  
     0.775
EEF61117.1
Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; KEGG: mxa:MXAN_0889 RCC1 repeat domain protein.
 
    
0.737
EEF60011.1
Hypothetical protein.
       0.636
EEF60012.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: esa:ESA_01701 hypothetical protein.
       0.636
EEF60822.1
KEGG: min:Minf_2212 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
    
   0.564
EEF61133.1
KEGG: rrs:RoseRS_2999 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
    
   0.564
EEF61134.1
KEGG: cau:Caur_1978 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
    
   0.564
EEF61624.1
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; KEGG: ana:all0364 similar to prohormone convertase.
   
  0.539
EEF59992.1
PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; KEGG: mxa:MXAN_0889 RCC1 repeat domain protein.
 
 
  
0.520
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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