STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60065.1alpha-L-rhamnosidase; PFAM: Fibronectin type III domain protein; alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: bth:BT_2524 alpha-rhamnosidase. (1307 aa)    
Predicted Functional Partners:
EEF59355.1
Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: tle:Tlet_1148 alpha-N-arabinofuranosidase.
  
     0.749
EEF61708.1
Beta-galactosidase; PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 sugar binding; KEGG: ote:Oter_3622 glycoside hydrolase family 2 sugar binding; Belongs to the glycosyl hydrolase 2 family.
  
  0.731
EEF63191.1
Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: sus:Acid_4010 alpha-L-arabinofuranosidase-like protein.
  
     0.722
EEF63185.1
PFAM: protein of unknown function DUF1680; KEGG: bfr:BF0334 hypothetical protein.
  
     0.711
EEF58684.1
TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KEGG: ote:Oter_1303 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
  
   0.704
EEF62803.1
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sus:Acid_6668 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
  
  0.696
EEF63188.1
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sus:Acid_6668 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
  
  0.695
EEF62296.1
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sus:Acid_2894 glycoside hydrolase family protein.
  
  0.689
EEF60084.1
PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: ote:Oter_3370 TPR repeat-containing protein.
 
     0.632
EEF61364.1
alpha-L-rhamnosidase domain protein; PFAM: glycoside hydrolase family 2 sugar binding; alpha-L-rhamnosidase domain protein; KEGG: rba:RB9146 hypothetical protein.
  
     0.631
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.