STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60096.1KEGG: bch:Bcen2424_5292 hypothetical protein. (240 aa)    
Predicted Functional Partners:
EEF60097.1
Transcriptional regulator, AraC family; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: hch:HCH_05579 adenosine deaminase.
     0.930
EEF62446.1
Transcriptional regulator, AraC family; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sus:Acid_4009 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada.
     0.589
EEF59732.1
KEGG: atc:AGR_L_1124 hypothetical protein.
  
     0.538
EEF60098.1
PFAM: protein of unknown function DUF1486; KEGG: rme:Rmet_5449 protein of unknown function DUF1486.
 
     0.528
EEF59589.1
PFAM: alpha/beta hydrolase fold; KEGG: smd:Smed_3910 alpha/beta hydrolase fold.
  
     0.464
EEF57500.1
Metallophosphoesterase; PFAM: blue (type 1) copper domain protein; metallophosphoesterase; KEGG: aba:Acid345_4689 metallophosphoesterase.
  
     0.463
EEF59274.1
PFAM: Patatin; KEGG: nha:Nham_3555 patatin.
  
     0.463
EEF60092.1
KEGG: rme:Rmet_4095 protein of unknown function DUF1486.
  
     0.446
EEF61419.1
PFAM: Patatin; KEGG: acr:Acry_0496 patatin.
  
     0.432
EEF62972.1
KEGG: bxe:Bxe_B2092 hypothetical protein.
  
     0.402
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.