STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60197.1PFAM: protein of unknown function DUF1501; KEGG: rba:RB12159 hypothetical protein. (492 aa)    
Predicted Functional Partners:
EEF60198.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: sus:Acid_0974 hypothetical protein.
 
     0.947
EEF59629.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: sus:Acid_0974 hypothetical protein.
 
     0.779
EEF57671.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: rba:RB4803 signal peptide.
  
     0.775
EEF57985.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: sus:Acid_3952 hypothetical protein.
  
     0.775
EEF57987.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: pat:Patl_0815 hypothetical protein.
  
     0.775
EEF58792.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: rba:RB12155 signal peptide.
  
     0.775
EEF59706.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: rba:RB8437 cis/trans isomerase.
  
     0.775
EEF62589.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: sus:Acid_6186 hypothetical protein.
  
     0.775
EEF62707.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: rba:RB4803 signal peptide.
  
     0.775
EEF62710.1
PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: sus:Acid_6186 hypothetical protein.
  
     0.775
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.