STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60373.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
EEF60371.1
KEGG: ote:Oter_2500 hypothetical protein.
       0.773
EEF60372.1
PFAM: phosphate transporter; KEGG: sml:Smlt1706 putative low-affinity inorganic phosphate transporter integral membrane protein PitA.
       0.773
EEF60374.1
PFAM: NADPH-dependent FMN reductase; KEGG: hma:rrnAC2773 NADPH-dependent FMN reductase.
       0.615
EEF60365.1
Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aae:aq_1117 NtrC family transcriptional regulator.
       0.530
EEF60366.1
Glutamine amidotransferase-like protein; KEGG: pgi:PG1701 glutamine amidotransferase, class II/dipeptidase.
       0.530
EEF60367.1
PFAM: transposase IS4 family protein; KEGG: amr:AM1_5147 transposase, IS4 family.
       0.530
EEF60368.1
PFAM: peptidase C26; KEGG: tte:TTE2700 glutamine amidotransferase.
       0.530
EEF60369.1
KEGG: ote:Oter_2377 hypothetical protein.
       0.530
ispF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.530
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.