STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60448.1PFAM: glycosyl transferase family 9; KEGG: sus:Acid_0378 glycosyl transferase family protein. (310 aa)    
Predicted Functional Partners:
EEF57274.1
TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: sfu:Sfum_0375 lipopolysaccharide heptosyltransferase I.
  
  
  0.922
EEF57993.1
TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: sus:Acid_6381 lipopolysaccharide heptosyltransferase II.
  
  
  0.921
EEF58245.1
PFAM: glycosyl transferase family 9; KEGG: gme:Gmet_2341 glycosyl transferase, family 9.
  
  
  0.920
EEF61239.1
PFAM: glycosyl transferase family 9; KEGG: spe:Spro_4832 lipopolysaccharide heptosyltransferase III, putative.
 
  
  0.805
EEF59737.1
PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: gur:Gura_0373 alpha-tubulin suppressor and related RCC1domain-containing protein.
    
   0.797
EEF59992.1
PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; KEGG: mxa:MXAN_0889 RCC1 repeat domain protein.
    
   0.797
EEF61048.1
PFAM: PfkB domain protein; KEGG: ote:Oter_3972 PfkB domain protein.
 
  
  0.797
EEF61684.1
PFAM: Immunoglobulin I-set domain protein; Immunoglobulin domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: mxa:MXAN_0889 RCC1 repeat domain protein.
    
   0.797
EEF61443.1
PFAM: PfkB domain protein; KEGG: rrs:RoseRS_2788 PfkB domain protein.
 
  
  0.769
EEF57255.1
PFAM: glycosyl transferase family 9; KEGG: abo:ABO_2215 heptosyltransferase II, putatative.
  
     0.768
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.