STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60512.1KEGG: nar:Saro_1777 hypothetical protein. (602 aa)    
Predicted Functional Partners:
EEF58651.1
PFAM: Hemolysin-type calcium-binding region; KEGG: mar:MAE_23460 hypothetical protein.
  
 
   0.765
EEF60613.1
TIGRFAM: autotransporter-associated beta strand repeat protein; KEGG: bur:Bcep18194_B0758 outer membrane autotransporter barrel.
  
 
   0.765
EEF63217.1
Hypothetical protein; KEGG: ote:Oter_2120 fibronectin type III domain protein.
  
     0.757
EEF57209.1
PFAM: Immunoglobulin I-set domain protein; Immunoglobulin domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: hmo:HM1_0137 hypothetical protein.
  
     0.747
EEF63146.1
PFAM: Fibronectin type III domain protein; KEGG: gvi:glr0592 hypothetical protein.
  
  0.742
EEF60882.1
Hypothetical protein; KEGG: dol:Dole_0200 cytochrome c class I.
  
  
  0.740
EEF57206.1
SMART: Immunoglobulin subtype; KEGG: cpy:Cphy_1713 coagulation factor 5/8 type domain-containing protein.
  
  
  0.736
EEF59159.1
KEGG: rba:RB5008 signal peptide; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.733
EEF63380.1
KEGG: bte:BTH_II1774 serine protease, subtilase family; TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: Fibronectin type III domain protein; Immunoglobulin I-set domain protein; Immunoglobulin V-set domain protein; SMART: Immunoglobulin subtype; PA14 domain protein.
  
     0.732
EEF59130.1
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Cna B domain protein; KEGG: bcz:BCZK1464 cell surface protein.
  
  
  0.705
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.