STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60541.1PFAM: secretion protein HlyD family protein; KEGG: glo:Glov_3107 secretion protein HlyD family protein. (302 aa)    
Predicted Functional Partners:
EEF60539.1
PFAM: ABC-2 type transporter; KEGG: swo:Swol_2449 ABC-type multidrug transport system permease component.
  
 0.970
EEF60540.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_5990 ABC transporter related.
  
 0.951
EEF61571.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sus:Acid_7569 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.654
EEF59552.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sfu:Sfum_2811 efflux transporter, RND family, MFP subunit.
  
     0.653
EEF59551.1
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: sfu:Sfum_2810 ABC transporter related; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
 
 0.650
EEF58871.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ote:Oter_3814 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.608
EEF62575.1
PFAM: outer membrane efflux protein; KEGG: ote:Oter_3801 outer membrane efflux protein.
  
  0.593
EEF62907.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sfu:Sfum_1458 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.569
EEF62624.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: reh:H16_B0582 cation/multidrug efflux system, mebrane-fusion component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.563
EEF61621.1
PFAM: outer membrane efflux protein; KEGG: gme:Gmet_1549 outer membrane efflux protein.
  
  0.538
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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