STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60551.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_2358 ABC transporter-related protein. (255 aa)    
Predicted Functional Partners:
EEF62334.1
PFAM: protein of unknown function DUF214; KEGG: rba:RB6983 ATP-binding/permease fusion ABC transporter.
 
  0.965
EEF63427.1
PFAM: protein of unknown function DUF214; KEGG: cts:Ctha_0585 protein of unknown function DUF214.
 
  0.965
EEF63428.1
PFAM: protein of unknown function DUF214; KEGG: cts:Ctha_0584 protein of unknown function DUF214.
 
  0.964
EEF58605.1
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_4201 putative macrolide efflux ABC transporter, permease protein.
 
  0.960
EEF59891.1
PFAM: protein of unknown function DUF214; KEGG: ote:Oter_3645 protein of unknown function DUF214.
 
  0.957
EEF60550.1
PFAM: protein of unknown function DUF214; KEGG: rba:RB7074 ABC transporter permease.
  
  0.896
EEF61528.1
PFAM: protein of unknown function DUF214; KEGG: min:Minf_0204 ABC-type transport system, involved in lipoprotein release, permease component.
  0.890
EEF60549.1
KEGG: rba:RB7538 hypothetical protein.
       0.746
EEF60548.1
Hypothetical protein.
       0.741
EEF62573.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: net:Neut_0974 ABC transporter-related protein.
  
  
 
0.739
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.