STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60726.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ana:all3753 probable short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)    
Predicted Functional Partners:
EEF60006.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: npu:Npun_F2183 amino acid adenylation domain-containing protein.
  
 
 0.838
EEF60978.1
Amino acid adenylation domain protein; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mar:MAE_60000 McnE protein.
  
 
 0.838
EEF58139.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mar:MAE_60000 McnE protein.
  
 
 0.810
EEF60272.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein.
  
 
 0.810
EEF62760.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mar:MAE_60000 McnE protein.
  
 
 0.810
EEF61958.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; Luciferase-like monooxygenase; KEGG: mxa:MXAN_4532 non-ribosomal peptide synthase.
    
 0.804
EEF63175.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mxa:MXAN_4415 non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.793
EEF63071.1
PFAM: condensation domain protein; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mxa:MXAN_4415 non-ribosomal peptide synthetase/polyketide synthase.
  
 0.790
EEF60727.1
PFAM: protein of unknown function DUF72; KEGG: aba:Acid345_0813 protein of unknown function DUF72.
       0.773
EEF58138.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: bid:Bind_0846 amino acid adenylation domain protein.
   
 0.760
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.