STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60789.1PFAM: GCN5-related N-acetyltransferase; KEGG: cyt:cce_0928 hypothetical protein. (139 aa)    
Predicted Functional Partners:
argG
PFAM: argininosuccinate synthase; KEGG: ote:Oter_0688 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.645
EEF58980.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr1088 GNAT family acetyltransferase.
 
  
  0.604
EEF60788.1
KEGG: cte:CT1283 hypothetical protein.
       0.550
EEF60790.1
Hypothetical protein.
       0.547
EEF63261.1
PFAM: amidinotransferase; LOR/SDH bifunctional protein conserved domain protein; KEGG: ava:Ava_2273 hypothetical protein.
  
  
  0.526
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: ote:Oter_4045 argininosuccinate lyase.
  
 
 0.513
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
  
 
 0.506
EEF62683.1
PFAM: GCN5-related N-acetyltransferase; KEGG: shl:Shal_0075 GCN5-related N-acetyltransferase.
  
  
  0.492
EEF59842.1
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cau:Caur_0952 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
    
  0.490
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
  
    0.485
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.