STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61011.1TIGRFAM: signal peptidase I; KEGG: min:Minf_0378 signal peptidase I; Belongs to the peptidase S26 family. (168 aa)    
Predicted Functional Partners:
EEF61161.1
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: dol:Dole_0321 signal peptidase I; Belongs to the peptidase S26 family.
 
  
  0.838
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
  
 0.751
EEF58183.1
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: lbu:LBUL_1124 signal peptidase I; Belongs to the peptidase S26 family.
 
  
  0.747
EEF60725.1
KEGG: ote:Oter_1523 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; Belongs to the peptidase S26 family.
 
  
  0.743
EEF61031.1
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: pth:PTH_1717 signal peptidase I; Belongs to the peptidase S26 family.
 
  
  0.711
EEF61010.1
KEGG: min:Minf_0378 signal peptidase I.
       0.686
EEF60004.1
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: bce:BC3837 signal peptidase I; Belongs to the peptidase S26 family.
  
     0.619
EEF61008.1
PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: gur:Gura_4381 phosphoglucomutase.
 
     0.558
EEF62150.1
PFAM: Abortive infection protein; KEGG: mta:Moth_1913 abortive infection protein.
  
     0.411
EEF60567.1
SMART: helicase c2; KEGG: min:Minf_0280 Rad3-related DNA helicase.
  
    0.403
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.