STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61029.1KEGG: ote:Oter_2645 hypothetical protein. (257 aa)    
Predicted Functional Partners:
EEF58292.1
PFAM: H+transporting two-sector ATPase C subunit; KEGG: ote:Oter_0880 H+transporting two-sector ATPase C subunit.
  
     0.741
EEF61058.1
PFAM: peptidase M24; KEGG: mgm:Mmc1_3486 peptidase M24; Belongs to the peptidase M24B family.
 
  
 0.726
EEF59924.1
PFAM: protein of unknown function DUF490; KEGG: ote:Oter_3491 protein of unknown function DUF490.
  
     0.716
EEF58336.1
PFAM: Peptidase M23; KEGG: ote:Oter_2787 peptidase M23.
  
     0.692
EEF57004.1
PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: min:Minf_1252 transcription elongation factor GreA fused to uncharacterized associated domain; Belongs to the GreA/GreB family.
  
     0.613
EEF58407.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ote:Oter_2783 endonuclease/exonuclease/phosphatase.
  
     0.612
EEF61074.1
PFAM: aminotransferase class-III; KEGG: gur:Gura_2244 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.608
EEF61726.1
PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: min:Minf_0769 signal transduction histidine kinase with GAF domain.
  
     0.605
EEF61010.1
KEGG: min:Minf_0378 signal peptidase I.
  
     0.597
EEF57736.1
KEGG: ote:Oter_1490 hypothetical protein.
  
     0.596
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.