STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61058.1PFAM: peptidase M24; KEGG: mgm:Mmc1_3486 peptidase M24; Belongs to the peptidase M24B family. (402 aa)    
Predicted Functional Partners:
EEF61056.1
Signal peptide peptidase SppA, 36K type; KEGG: min:Minf_0075 periplasmic serine protease, ClpP class; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49.
       0.791
EEF58196.1
TIGRFAM: IMP dehydrogenase family protein; PFAM: IMP dehydrogenase/GMP reductase; KEGG: min:Minf_0245 IMP dehydrogenase/GMP reductase.
   
   0.775
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
       0.773
EEF61029.1
KEGG: ote:Oter_2645 hypothetical protein.
 
  
 0.726
EEF57497.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ote:Oter_2142 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.721
EEF57304.1
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
 
 0.709
EEF57903.1
Endothelin-converting enzyme 1; PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: ote:Oter_1810 neprilysin.
   
 
 0.655
EEF61228.1
PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: mka:MK0117 shikimate 5-dehydrogenase.
    
  0.588
EEF61055.1
Hypothetical protein.
       0.571
EEF59034.1
PFAM: Creatininase; KEGG: syn:slr0596 creatinine amidohydrolase.
    
  0.559
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.