STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61067.1PFAM: Mammalian cell entry related domain protein; KEGG: sfu:Sfum_2416 mammalian cell entry related domain protein. (333 aa)    
Predicted Functional Partners:
EEF61068.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2415 ABC transporter related.
 
   
 0.942
EEF61069.1
PFAM: protein of unknown function DUF140; KEGG: sfu:Sfum_2414 protein of unknown function DUF140.
 
     0.900
EEF57773.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pca:Pcar_2750 ABC-type transport system, ATPase component.
 
   
 0.628
EEF57867.1
KEGG: ppd:Ppro_0395 hypothetical protein.
  
     0.612
EEF60478.1
PFAM: VacJ family lipoprotein; KEGG: sml:Smlt4675 putative intercellular spreading VacJ lipoprotein.
  
    0.553
EEF60077.1
PFAM: VacJ family lipoprotein; KEGG: rde:RD1_0940 VacJ-like lipoprotein, putative.
  
    0.528
EEF58430.1
PFAM: VacJ family lipoprotein; KEGG: rde:RD1_0940 VacJ-like lipoprotein, putative.
  
    0.527
EEF61070.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ote:Oter_3535 cobyrinic acid ac-diamide synthase.
       0.497
EEF61066.1
KEGG: mca:MCA0364 putative lipoprotein.
       0.462
EEF61213.1
PFAM: sulfotransferase; KEGG: mca:MCA2756 hypothetical protein.
  
     0.426
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.