STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61207.1PFAM: sodium/hydrogen exchanger; KEGG: syn:slr0415 Na+/H+ antiporter. (411 aa)    
Predicted Functional Partners:
EEF59068.1
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: rru:Rru_A1713 NAD(P)H dehydrogenase (quinone).
  
 
 0.779
EEF62251.1
PFAM: TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: pen:PSEEN5507 sodium/proton antiporter.
 
  
0.660
EEF61208.1
KEGG: sus:Acid_3386 hypothetical protein.
       0.603
EEF61342.1
Hypothetical protein.
  
 
 0.569
EEF60843.1
KEGG: gur:Gura_0539 hypothetical protein.
    
   0.530
EEF61206.1
KEGG: gbe:GbCGDNIH1_0181 hypothetical protein.
       0.517
EEF57571.1
KEGG: amt:Amet_3675 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
     
 0.509
EEF58141.1
Chloride channel core; PFAM: CBS domain containing protein; Chloride channel core; KEGG: sus:Acid_3655 Cl-channel, voltage-gated family protein.
 
  
 0.507
EEF58937.1
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: ote:Oter_1912 phosphotransferase system, phosphocarrier protein HPr.
    
  0.505
EEF61071.1
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: pol:Bpro_4613 sigma 54 modulation protein / SSU ribosomal protein S30P.
  
  
 0.503
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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