STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF60959.1Hypothetical protein; KEGG: rba:RB11016 signal peptide. (308 aa)    
Predicted Functional Partners:
EEF62439.1
Hypothetical protein; KEGG: rba:RB5399 signal peptide.
  
     0.775
EEF59315.1
Hypothetical protein; KEGG: rba:RB11015 signal peptide.
  
     0.774
EEF63040.1
KEGG: rba:RB13312 hypothetical protein.
  
     0.774
EEF59314.1
Hypothetical protein; KEGG: rba:RB11015 signal peptide.
  
     0.773
EEF59316.1
KEGG: ote:Oter_2674 hypothetical protein.
  
     0.773
EEF60748.1
Hypothetical protein; KEGG: rba:RB8214 putative membrane bound transporter.
  
     0.666
EEF59884.1
KEGG: nca:Noca_3028 hypothetical protein.
  
 
  0.654
EEF57972.1
Hypothetical protein; KEGG: ote:Oter_1762 type IV pilus biogenesis protein.
  
     0.650
EEF59220.1
KEGG: ote:Oter_3736 hypothetical protein.
  
     0.609
EEF57973.1
Hypothetical protein; KEGG: ote:Oter_1762 type IV pilus biogenesis protein.
  
     0.580
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.