STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61532.1KEGG: min:Minf_0412 hypothetical protein. (616 aa)    
Predicted Functional Partners:
EEF61533.1
Hypothetical protein; KEGG: min:Minf_0411 ABC-type transport system involved in gliding motility, auxiliary component.
 
     0.895
EEF61534.1
PFAM: ABC-2 type transporter; KEGG: min:Minf_0410 ABC-type transport system involved in gliding motility, permease component.
 
     0.832
EEF61535.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: min:Minf_0409 ABC-type transport system involved in gliding motility, ATPase component.
 
     0.777
EEF61531.1
KEGG: min:Minf_1241 hypothetical protein.
       0.775
EEF61129.1
KEGG: min:Minf_1546 hypothetical protein.
  
     0.699
EEF61530.1
Hypothetical protein.
       0.576
EEF62981.1
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ote:Oter_2790 tetratricopeptide TPR_2 repeat protein.
  
     0.576
EEF59896.1
PFAM: outer membrane efflux protein; KEGG: aba:Acid345_1445 outer membrane efflux protein.
  
     0.575
EEF59923.1
PFAM: surface antigen variable number repeat protein; KEGG: ote:Oter_3490 surface antigen (D15).
  
     0.533
EEF57933.1
KEGG: dol:Dole_0153 hypothetical protein.
  
     0.515
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.