STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61574.1PFAM: outer membrane efflux protein; KEGG: aba:Acid345_1698 outer membrane efflux protein. (429 aa)    
Predicted Functional Partners:
EEF61573.1
PFAM: acriflavin resistance protein; KEGG: sus:Acid_7568 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.924
EEF61571.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sus:Acid_7569 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.855
EEF59551.1
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: sfu:Sfum_2810 ABC transporter related; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
   
 
 0.787
EEF61572.1
KEGG: sus:Acid_7570 hypothetical protein.
       0.678
EEF62908.1
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: sat:SYN_02947 acriflavin resistance plasma membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.609
EEF57578.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: esa:ESA_02521 hypothetical protein.
  
  0.594
EEF58873.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: acriflavin resistance protein; outer membrane efflux protein; KEGG: ote:Oter_3813 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.588
EEF61563.1
PFAM: secretion protein HlyD family protein; KEGG: npu:Npun_F3670 secretion protein HlyD family protein.
  
  0.584
EEF61575.1
Hypothetical protein.
       0.580
EEF61569.1
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mta:Moth_1478 two component transcriptional regulator.
   
   0.566
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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