STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61342.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
EEF60103.1
FAD-binding domain protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: rha:RHA1_ro01797 sulfite reductase [NADPH] flavoprotein alpha-component.
    
 0.891
EEF60124.1
Inorganic diphosphatase; PFAM: CBS domain containing protein; DHHA2 domain protein; DRTGG domain protein; KEGG: ote:Oter_2673 inorganic diphosphatase.
   
 0.792
EEF58292.1
PFAM: H+transporting two-sector ATPase C subunit; KEGG: ote:Oter_0880 H+transporting two-sector ATPase C subunit.
   
 0.740
EEF61505.1
PFAM: MgtC/SapB transporter; KEGG: mag:amb2756 hypothetical protein.
  
 
 0.726
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.685
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 
 0.648
EEF59809.1
PFAM: Inorganic pyrophosphatase; KEGG: sus:Acid_3005 inorganic diphosphatase.
     
 0.637
EEF63146.1
PFAM: Fibronectin type III domain protein; KEGG: gvi:glr0592 hypothetical protein.
   
 
 0.610
EEF60824.1
KEGG: min:Minf_0082 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
   
 
 0.608
EEF58290.1
PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: min:Minf_2420 F0F1-type ATP synthase, delta subunit.
   
  0.607
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.