STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61351.1PFAM: putative esterase; KEGG: bba:Bd1622 enterochelin esterase. (364 aa)    
Predicted Functional Partners:
EEF57129.1
TIGRFAM: membrane-bound dehydrogenase domain protein; PFAM: coagulation factor 5/8 type domain protein; cytochrome c class I; KEGG: rba:RB3322 cytochrome c.
  
  
  0.768
EEF58139.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mar:MAE_60000 McnE protein.
  
  
 0.683
EEF60272.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein.
  
  
 0.683
EEF62760.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mar:MAE_60000 McnE protein.
  
  
 0.683
EEF62613.1
PFAM: putative esterase; glycoside hydrolase family 13 domain protein; KEGG: sus:Acid_2073 putative esterase.
  
     0.544
EEF58089.1
TIGRFAM: membrane-bound dehydrogenase domain protein; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; KEGG: rba:RB4621 signal peptide.
  
  
  0.536
EEF63178.1
TIGRFAM: heme-binding protein; KEGG: rba:RB4621 signal peptide.
  
  
  0.530
EEF60470.1
TIGRFAM: membrane-bound dehydrogenase domain protein; KEGG: rba:RB3322 cytochrome c.
  
  
  0.529
EEF61352.1
Hypothetical protein.
       0.513
EEF63177.1
TIGRFAM: heme-binding protein; PFAM: coagulation factor 5/8 type domain protein; KEGG: rba:RB5811 hypothetical protein.
  
  
  0.508
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.