STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61912.1PFAM: histone deacetylase superfamily; KEGG: ote:Oter_0860 histone deacetylase superfamily. (287 aa)    
Predicted Functional Partners:
EEF61833.1
PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: aha:AHA_0864 ATP-dependent helicase HepA.
    
 0.966
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
    
 0.950
EEF61789.1
KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
   
 0.906
EEF58569.1
SMART: nuclear protein SET; KEGG: mbn:Mboo_2041 nuclear protein SET.
  
 0.893
EEF62546.1
PFAM: nuclear protein SET; KEGG: pub:SAR11_0459 nuclear protein SET.
  
 0.893
EEF57161.1
TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ote:Oter_3521 D-3-phosphoglycerate dehydrogenase.
  
 
 0.892
EEF60842.1
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_B0029 AAA+ class-like ATPase.
   
 0.884
EEF62991.1
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mta:Moth_1118 AAA ATPase.
   
 0.884
EEF62628.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: cau:Caur_1702 uridine kinase.
   
  0.882
EEF58739.1
PFAM: SWIB/MDM2 domain protein; KEGG: ote:Oter_0910 SWIB/MDM2 domain protein.
   
  0.853
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.