STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61997.1Hypothetical protein; KEGG: mmu:100041170 predicted gene, 100041170. (666 aa)    
Predicted Functional Partners:
EEF63146.1
PFAM: Fibronectin type III domain protein; KEGG: gvi:glr0592 hypothetical protein.
 
  0.807
EEF60128.1
TIGRFAM: heme-binding protein; KEGG: rba:RB24 L-sorbosone dehydrogenase.
  
  
  0.718
EEF61546.1
Hypothetical protein; KEGG: mtf:TBFG_13545 PE-PGRS family protein.
  
     0.700
EEF61624.1
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; KEGG: ana:all0364 similar to prohormone convertase.
    
  0.698
EEF62676.1
PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_0089 GDSL family lipase.
  
 
   0.690
EEF58611.1
KEGG: sen:SACE_0944 hypothetical protein.
  
     0.678
EEF57902.1
TIGRFAM: heme-binding protein; KEGG: rba:RB4167 hypothetical protein.
  
  
  0.673
EEF61358.1
KEGG: ote:Oter_3767 hypothetical protein.
  
     0.669
EEF61699.1
KEGG: ote:Oter_0962 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD.
  
     0.624
EEF59146.1
PFAM: Cna B domain protein; KEGG: nha:Nham_3087 outer membrane autotransporter barrel.
 
 
 
0.622
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.