STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61784.1PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: scl:sce2055 hypothetical protein. (599 aa)    
Predicted Functional Partners:
EEF61783.1
Hypothetical protein.
       0.554
EEF60482.1
Conserved repeat domain protein; KEGG: hau:Haur_4417 peptidase S8 and S53 subtilisin kexin sedolisin; TIGRFAM: conserved repeat domain protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protein of unknown function DUF11; Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype.
  
     0.520
EEF61038.1
PFAM: Immunoglobulin I-set domain protein; Immunoglobulin V-set domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: jan:Jann_2833 hypothetical protein.
  
     0.513
EEF58023.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mxa:MXAN_5304 hypothetical protein.
  
     0.488
EEF61782.1
PFAM: protein of unknown function DUF1585; Protein of unknown function DUF1587; Protein of unknown function DUF1588; Protein of unknown function DUF1592; Protein of unknown function DUF1595; KEGG: rba:RB5064 signal peptide.
 
     0.482
EEF61781.1
PFAM: protein of unknown function DUF1552; KEGG: rba:RB5066 hypothetical protein.
 
     0.471
EEF62986.1
KEGG: ote:Oter_1394 immunoglobulin I-set domain protein.
  
     0.434
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.