STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF61818.1TIGRFAM: FeS assembly SUF system protein SufT; PFAM: protein of unknown function DUF59; KEGG: noc:Noc_2485 protein of unknown function DUF59. (189 aa)    
Predicted Functional Partners:
EEF61817.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
    0.893
EEF61819.1
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: ote:Oter_0603 SUF system FeS assembly protein, NifU family.
 
    0.867
EEF59085.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mba:Mbar_A3236 xylene monooxygenase electron transfer component.
  
 
 0.844
EEF61820.1
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: pol:Bpro_4271 FeS assembly protein SufD.
 
   
 0.844
EEF61815.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: cth:Cthe_0721 nitrogen-fixing NifU-like protein.
  
    0.835
EEF61729.1
FeS assembly ATPase SufC; KEGG: chu:CHU_0977 iron-regulated ABC transporter, ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.771
EEF61950.1
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit.
    
  0.718
EEF61731.1
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: cbd:CBUD_1448 FeS assembly protein SufB.
 
   
 0.698
EEF61816.1
PFAM: Rhodanese domain protein; KEGG: neu:NE2353 molybdopterin/thiamine biosynthesis family protein.
       0.643
EEF59897.1
PFAM: thioesterase superfamily protein; KEGG: dau:Daud_0327 thioesterase superfamily protein.
  
 
 0.491
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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