STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF62346.1PFAM: Domain of unknown function DUF1801; KEGG: bha:BH2088 hypothetical protein. (197 aa)    
Predicted Functional Partners:
EEF62345.1
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: chu:CHU_2913 hypothetical protein.
 
     0.883
EEF62344.1
Putative transcriptional regulator, ArsR family; KEGG: aas:Aasi_0528 hypothetical protein.
 
     0.818
EEF62347.1
KEGG: aba:Acid345_3466 hypothetical protein.
       0.773
EEF62348.1
PFAM: Domain of unknown function DUF1801; KEGG: rci:RCIX1712 hypothetical protein.
 
     0.589
EEF60093.1
KEGG: scl:sce5426 hypothetical protein.
  
     0.463
EEF60068.1
KEGG: scl:sce5426 hypothetical protein.
  
     0.443
EEF62343.1
KEGG: aba:Acid345_1484 hypothetical protein.
       0.436
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.