STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF62513.1Hypothetical protein; KEGG: gsu:GSU0754 fibronectin type III domain-containing protein. (295 aa)    
Predicted Functional Partners:
EEF62514.1
Hypothetical protein; KEGG: nha:Nham_3087 outer membrane autotransporter barrel.
   
   0.796
EEF61546.1
Hypothetical protein; KEGG: mtf:TBFG_13545 PE-PGRS family protein.
  
 
   0.787
EEF63146.1
PFAM: Fibronectin type III domain protein; KEGG: gvi:glr0592 hypothetical protein.
 
 
 0.751
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.714
EEF62075.1
Hypothetical protein; KEGG: dol:Dole_1788 polymorphic membrane protein Chlamydia.
  
 
   0.699
EEF60826.1
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: sth:STH1643 competence-damage inducible protein; Belongs to the CinA family.
    
  0.669
EEF62714.1
PFAM: PKD domain containing protein; Polymorphic membrane protein Chlamydia; KEGG: dol:Dole_1704 polymorphic outer membrane protein.
  
 
   0.662
EEF59146.1
PFAM: Cna B domain protein; KEGG: nha:Nham_3087 outer membrane autotransporter barrel.
  
 
0.601
EEF60033.1
KEGG: rca:Rcas_1718 hypothetical protein.
    
   0.600
EEF62676.1
PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_0089 GDSL family lipase.
  
  0.567
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.