STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF62554.1PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; KEGG: rba:RB4278 hypothetical protein. (523 aa)    
Predicted Functional Partners:
EEF60399.1
PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: hmo:HM1_0138 hypothetical protein.
  
     0.616
EEF61560.1
PFAM: coagulation factor 5/8 type domain protein; SMART: Immunoglobulin subtype; KEGG: mbr:MONBRDRAFT_22044 hypothetical protein Pfam: He_PIG PKD Candida_ALS Peptidase_M4_C PROSITE: PROKAR_LIPOPROTEIN THR_RICH PKD.
  
     0.603
EEF62518.1
Hypothetical protein; KEGG: ote:Oter_0854 immunoglobulin I-set domain protein.
  
     0.529
EEF62555.1
KEGG: xla:494817 hypothetical LOC494817 Pfam: DUF937 HEAT Coprinus_mating PROSITE: SER_RICH HEAT_REPEAT.
       0.522
EEF62556.1
Hypothetical protein.
       0.522
EEF63030.1
KEGG: ote:Oter_3065 PA14 domain protein.
  
     0.509
EEF57248.1
PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; LamG domain protein jellyroll fold domain protein; KEGG: dsy:DSY0542 hypothetical protein.
  
     0.469
EEF61314.1
Hypothetical protein; KEGG: xcv:XCV4444 putative hemagglutinin-related protein.
  
     0.440
EEF62557.1
Hypothetical protein.
       0.412
EEF57209.1
PFAM: Immunoglobulin I-set domain protein; Immunoglobulin domain protein; SMART: Immunoglobulin C2 type; Immunoglobulin subtype; KEGG: hmo:HM1_0137 hypothetical protein.
  
     0.408
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.