STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF63161.1Hypothetical protein. (412 aa)    
Predicted Functional Partners:
EEF63164.1
PFAM: O-antigen polymerase; KEGG: bce:BC1588 secreted polysaccharide polymerase.
  
 
  0.668
EEF63160.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mhu:Mhun_3084 NAD-dependent epimerase/dehydratase.
  
 
  0.667
EEF63163.1
PFAM: glycosyl transferase family 2; KEGG: fjo:Fjoh_0295 glycosyl transferase family protein.
  
    0.647
EEF63162.1
KEGG: pth:PTH_1082 hypothetical protein.
       0.645
EEF58675.1
(1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase; KEGG: ppd:Ppro_3267 malto-oligosyltrehalose synthase.
     
 0.633
EEF63165.1
KEGG: mar:MAE_41580 serine acetyltransferase.
  
    0.561
EEF63166.1
PFAM: glycosyl transferase group 1; KEGG: fps:FP1247 glycosyl transferase, group 1 family protein.
       0.527
EEF63167.1
PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_0292 glycosyl transferase, group 1.
       0.527
EEF63168.1
PFAM: glycosyl transferase group 1; KEGG: gfo:GFO_0584 glycosyl transferases group 1.
       0.527
EEF63169.1
PFAM: glycosyl transferase group 1; KEGG: mbu:Mbur_0726 glycosyl transferase, group 1.
       0.527
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.