STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF63180.1KEGG: sus:Acid_1575 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (380 aa)    
Predicted Functional Partners:
EEF58704.1
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 43; KEGG: ote:Oter_2529 alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
     0.874
EEF61435.1
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 43; KEGG: fjo:Fjoh_2025 alpha-N-arabinofuranosidase.
     0.687
EEF63077.1
PFAM: Domain of unknown function DUF1793; KEGG: sus:Acid_2314 glutaminase.
  
  
  0.666
EEF63182.1
PFAM: Domain of unknown function DUF1793; KEGG: sus:Acid_2314 glutaminase.
  
  
  0.659
EEF63181.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
       0.578
EEF58611.1
KEGG: sen:SACE_0944 hypothetical protein.
  
     0.556
EEF62676.1
PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_0089 GDSL family lipase.
  
     0.547
EEF57833.1
PFAM: glycoside hydrolase family 43; KEGG: bth:BT_3516 arabinan endo-1,5-alpha-L-arabinosidase A precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.542
EEF58877.1
KEGG: atc:AGR_pAT_804 hypothetical protein.
  
     0.537
EEF63185.1
PFAM: protein of unknown function DUF1680; KEGG: bfr:BF0334 hypothetical protein.
 
     0.537
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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