STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF63185.1PFAM: protein of unknown function DUF1680; KEGG: bfr:BF0334 hypothetical protein. (675 aa)    
Predicted Functional Partners:
EEF63182.1
PFAM: Domain of unknown function DUF1793; KEGG: sus:Acid_2314 glutaminase.
 
     0.848
EEF63188.1
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sus:Acid_6668 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
 
     0.788
EEF63184.1
Hypothetical protein.
       0.773
EEF63077.1
PFAM: Domain of unknown function DUF1793; KEGG: sus:Acid_2314 glutaminase.
  
     0.769
EEF57621.1
PFAM: glycoside hydrolase family 76; KEGG: ppp:PHYPADRAFT_170351 hypothetical protein Pfam: Glyco_hydro_76 Ada_Zn_binding.
  
     0.749
EEF57368.1
PFAM: glycoside hydrolase family 76; KEGG: ppp:PHYPADRAFT_170351 hypothetical protein Pfam: Glyco_hydro_76 Ada_Zn_binding.
  
     0.743
EEF57833.1
PFAM: glycoside hydrolase family 43; KEGG: bth:BT_3516 arabinan endo-1,5-alpha-L-arabinosidase A precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.719
EEF60065.1
alpha-L-rhamnosidase; PFAM: Fibronectin type III domain protein; alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: bth:BT_2524 alpha-rhamnosidase.
  
     0.711
EEF61435.1
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 43; KEGG: fjo:Fjoh_2025 alpha-N-arabinofuranosidase.
 
     0.696
EEF57646.1
PFAM: glycoside hydrolase family 76; Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; LamG domain protein jellyroll fold domain protein; Dystroglycan-type cadherin domain protein; KEGG: ppp:PHYPADRAFT_170351 hypothetical protein Pfam: Glyco_hydro_76 Ada_Zn_binding.
  
     0.686
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.