STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF63239.1PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mmi:MMAR_5185 putative regulatory protein. (194 aa)    
Predicted Functional Partners:
EEF63238.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: bha:BH0525 positive regulator of sigma-B activity (switch protein/serine-threonine kinase).
 
     0.950
EEF59484.1
PFAM: GAF domain protein; KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
  
 
 0.921
EEF58388.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: xcb:XC_0582 anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 0.895
EEF57033.1
Anti-sigma-factor antagonist and glycosyl transferase; KEGG: cau:Caur_1474 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
  
 0.891
EEF57772.1
PFAM: protein of unknown function DUF140; KEGG: pca:Pcar_2749 ABC-type transport system, permease component.
  
 0.890
EEF59684.1
PFAM: response regulator receiver; KEGG: dvl:Dvul_2403 two component, sigma54 specific, Fis family transcriptional regulator.
  
 
 0.882
EEF58545.1
KEGG: ote:Oter_2686 anti-sigma-factor antagonist.
  
 0.879
EEF62630.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: gsu:GSU1427 anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
 0.879
EEF58385.1
KEGG: aav:Aave_2063 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.873
EEF58571.1
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: cts:Ctha_0605 multi-sensor hybrid histidine kinase.
  
 
 0.859
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.