STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF63241.1PFAM: regulatory protein LuxR; response regulator receiver; KEGG: ote:Oter_1239 two component transcriptional regulator, LuxR family. (236 aa)    
Predicted Functional Partners:
EEF59684.1
PFAM: response regulator receiver; KEGG: dvl:Dvul_2403 two component, sigma54 specific, Fis family transcriptional regulator.
   
 0.954
EEF63240.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: ote:Oter_1238 histidine kinase.
   0.941
EEF58385.1
KEGG: aav:Aave_2063 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
   
 0.922
EEF59484.1
PFAM: GAF domain protein; KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
  
 0.914
EEF60018.1
PFAM: response regulator receiver; KEGG: npu:Npun_F2686 GAF sensor hybrid histidine kinase.
  
 0.897
EEF57193.1
Multi-sensor signal transduction histidine kinase; KEGG: bph:Bphy_7756 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  0.878
EEF57583.1
Putative PAS/PAC sensor protein; KEGG: npu:Npun_F2908 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein.
  
 0.866
EEF57189.1
KEGG: ote:Oter_0828 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold domain protein; SMART: PAS domain containing protein.
 
  0.861
EEF58571.1
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: cts:Ctha_0605 multi-sensor hybrid histidine kinase.
   
0.847
EEF57898.1
KEGG: ote:Oter_1747 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
  0.833
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.