STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF63266.1KEGG: afw:Anae109_2548 protein of unknown function DUF1355. (163 aa)    
Predicted Functional Partners:
EEF63265.1
KEGG: sus:Acid_6438 hypothetical protein.
      0.955
EEF63263.1
PFAM: protein of unknown function DUF58; KEGG: cts:Ctha_2438 protein of unknown function DUF58.
       0.797
EEF63264.1
TIGRFAM: conserved hypothetical membrane protein; PFAM: protein of unknown function DUF1550; KEGG: cts:Ctha_0978 hypothetical protein.
       0.797
EEF63268.1
KEGG: gfo:GFO_1939 hypothetical protein.
       0.785
EEF63267.1
KEGG: cts:Ctha_0639 hypothetical protein.
       0.773
EEF63269.1
5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase-like protein; KEGG: rba:RB6885 cytochrome c-554.
       0.773
EEF63270.1
PFAM: Thioredoxin domain; KEGG: dol:Dole_0131 thioredoxin domain-containing protein.
       0.773
EEF63262.1
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: ade:Adeh_4268 ATPase associated with various cellular activities, AAA-3.
       0.561
EEF63271.1
Hypothetical protein.
       0.546
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.