STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF63292.1PFAM: Rhodanese domain protein; KEGG: sgr:SGR_4165 hypothetical protein. (276 aa)    
Predicted Functional Partners:
EEF57452.1
PFAM: Rhodanese domain protein; KEGG: gme:Gmet_3018 rhodanese-like.
   
 0.821
EEF59943.1
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: rxy:Rxyl_0743 UBA/ThiF-type NAD/FAD binding fold.
   
 0.821
EEF61242.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ret:RHE_CH02415 putative cytochrome biogenesis protein.
    
 0.811
EEF61950.1
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit.
    
 0.808
EEF63457.1
PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: sus:Acid_7272 beta-lactamase domain-containing protein.
  
 0.801
EEF57331.1
Methionine synthase; KEGG: lbj:LBJ_4091 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein.
     
 0.776
EEF63199.1
Methionine synthase I (cobalamin-dependent) methyltransferase domain-like protein; KEGG: lch:Lcho_3268 homocysteine S-methyltransferase.
     
 0.776
EEF61824.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ote:Oter_0137 redoxin domain protein.
    
 0.775
EEF63293.1
Hypothetical protein; KEGG: spo:SPAPB1E7.04c chitinase (predicted).
       0.775
EEF63290.1
PFAM: Fibronectin type III domain protein; SMART: Hedgehog/intein hint domain protein; KEGG: sml:Smlt1009 putative glycine-rich autotransporter protein.
       0.773
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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