STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF63392.1TIGRFAM: autotransporter-associated beta strand repeat protein; KEGG: ote:Oter_0264 autotransporter-associated beta strand repeat protein. (774 aa)    
Predicted Functional Partners:
EEF63393.1
PFAM: sulfatase; KEGG: rba:RB2377 arylsulfatase.
     0.946
EEF63397.1
Sulfatase; KEGG: sus:Acid_1528 sulfatase.
 
     0.775
EEF60047.1
PFAM: sulfatase; KEGG: rba:RB1205 iduronate sulfatase.
  
     0.771
EEF61335.1
PFAM: sulfatase; KEGG: rba:RB12089 iduronate-2-sulfatase.
  
     0.769
EEF63463.1
PFAM: sulfatase; KEGG: rba:RB5383 sulfatase AtsG.
  
     0.754
EEF61580.1
PFAM: protein of unknown function DUF323; KEGG: fjo:Fjoh_2206 hypothetical protein.
  
 
   0.619
EEF58473.1
PFAM: protein of unknown function DUF323; KEGG: fjo:Fjoh_2206 hypothetical protein.
  
 
   0.611
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.