STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58395.1KEGG: ote:Oter_3065 PA14 domain protein. (357 aa)    
Predicted Functional Partners:
EEF58394.1
KEGG: mbb:BCG_3414c hypothetical protein.
      
0.773
EEF57331.1
Methionine synthase; KEGG: lbj:LBJ_4091 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein.
   
 
  0.691
EEF63199.1
Methionine synthase I (cobalamin-dependent) methyltransferase domain-like protein; KEGG: lch:Lcho_3268 homocysteine S-methyltransferase.
   
 
  0.691
EEF58023.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mxa:MXAN_5304 hypothetical protein.
    
  0.454
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.