STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF62191.1KEGG: reh:H16_A3626 hypothetical protein. (217 aa)    
Predicted Functional Partners:
EEF57636.1
PFAM: glycoside hydrolase family 1; KEGG: rrs:RoseRS_2967 glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.724
EEF58706.1
Conserved hypothetical protein; KEGG: gvi:gll2003 unknown protein; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.724
EEF59329.1
KEGG: amr:AM1_1890 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.724
EEF61995.1
KEGG: ote:Oter_3624 hypothetical protein.
  
 
 0.724
EEF61996.1
PFAM: glycoside hydrolase family 1; KEGG: ote:Oter_3623 glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.724
EEF60352.1
KEGG: scl:sce0055 hypothetical protein.
  
 
 0.589
EEF60689.1
KEGG: scl:sce0055 hypothetical protein.
  
 
 0.589
EEF58937.1
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: ote:Oter_1912 phosphotransferase system, phosphocarrier protein HPr.
    
  0.582
EEF62190.1
Hypothetical protein.
       0.570
EEF60930.1
TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: amr:AM1_5796 YdjC-like protein.
    
 0.493
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.